rs48730747 SNP Detail

Summary

• ID
  rs48730747
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:120123143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTGG GAGGTGGAGG CAGGAGGACC
  G
  GAAGGTCAGA GTCACCCTTT ATATA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145313793	ENSMUSSNP5056877	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss319932129	CHEV_1_122091990	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48730747					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:120123143 () rs orientation: forward

Symbol	Name	Function Class
Rr396237	regulatory region 396237	1827 bp upstream
Rr417161	regulatory region 417161	1735 bp proximal
Rr417162	regulatory region 417162	1936 bp proximal