rs48731505 SNP Detail

Summary

• ID
  rs48731505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120756921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCCATGTC AGAGCACTTA
  TAATAGGAAA ATACTGAAAG AGAGCACGTG GATCCATAAT CTAGACTAGC GCGGTAATGG
  AACTTGGGAA TGAAAAATTA ATGTATGGGT AGAGAACACT AGACTCCAGG AGGAGAGTTT
  CCTTAAAACT CTTTTGCCTC ACGAGTGACT TTTAAGCCTT TCGGCTTGTC CAGTTGACTC
  R
  ACTGGAGAGC GTAGCACATG GGAAATGTAA ATGAGGAAAA TACCTAATAA AAAAGGAAAA
  AAGGAAAAAA AAATAGAGAT TTCAACTGGC CTTGATGAAA ACAGTATGAT AATACCTGAA
  GTTATTAGAA ATAGGATTTC TGCATAACCT ATGTATAATT CTTAGATGTA CCCAAAGGAA
  ACAAAATGAT TATCCTCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134396216	ENSMUSSNP5536031	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss325960958	CHEV_X_118960833	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48731505					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120756921 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	within coordinates