rs48735061 SNP Detail

Summary

• ID
  rs48735061
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:93129747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACCCAACT TCCCTATTTT
  CTTCTGTATA AAAAGTTTGA TGCTCGATTT GACAAATTAC ATTCAGATTC TACACAACTT
  CTCCTGTGTG CATCTGTCTA TTATTTCATC CAACGCTTTG CCCACCTGCC CCAGAGACCC
  GCTCCACGCA GACAAAGGGA TCCAGAGGAT CTGCAGCAGG CATAGAGCTT GGGGATTTGG
  Y
  TCAGTATTAA AGACAGAACC CACATAAAGT CAGACAAAGT TATGTTCATT TGCAATCCCT
  TTACTCTTAT TGGGAGATAT GAGGTGCAGA CAAGAGAATT CCCAGAAATG CATGTGCCAG
  CCAACCTAGT ATATGCAGCT GCACATACCC AAAGGATCCC CTCCTTCTCA GAAGGTAAAA
  GATGAGTCTA GACTGAGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss137969095	ENSMUSSNP3750125	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48735061					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:93129747 () rs orientation: forward

Symbol	Name	Function Class
Gm59657	predicted gene, 59657	614 bp upstream
Rr387632	regulatory region 387632	within coordinates