rs48740782 SNP Detail

Summary

• ID
  rs48740782
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:36647593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAA GTCAGGGAGG TGTGGAGTGG
  W
  TCTTGGATAA GTTGTGCTAA AAATA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148859444	ENSMUSSNP5315829	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss322169142	CHEV_7_37733187	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48740782					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:36647593 () rs orientation: forward

Symbol	Name	Function Class
Gm72473	predicted gene, 72473	within coordinates
Rr170673	regulatory region 170673	1994 bp distal
Rr170674	regulatory region 170674	809 bp proximal