rs48743367 SNP Detail

Summary

• ID
  rs48743367
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:74872680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGTTGG GAAACCTGAA
  CTTTTCAATT TTGGTAAGAG TTCTGATAAG AGTTATAAGG CCTCTGGAAT ACATCCTATC
  CTCCACACCT TGCTTTTCAA CAGAAACTAG CTGGAAGGAG CACAGTAACT TGAGTCGCTT
  TTTAAACATC CATTAACCGA GGAAATTAAT TTTTCAGCCT GCACTCCAGA AGCCAGGCAC
  R
  ATTTCCAAAA AGCATTAAAT TCAAACGGAT GCAGTAAGGC AGATGGTAGG CGTGAGGCGT
  GTCCTTCCCT TGCAGCAGGG AAGATGCAGG GCTTCAGTGC CATATCATAA CTCCTTCTCG
  GGAGGCCGTC ACGACCCGAC CCACCAAAGT AGCAAGAGTG AACCTTGAGC CAACCGCACG
  CTCTGGCCCC GCCTGCTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52365275	NES15274466	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs48743367					SNP	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52365275	NES15274466	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:74872680 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1716	CpG island 1716	29 bp proximal
Gm40692	predicted gene, 40692	1821 bp downstream
Rab36	RAB36, member RAS oncogene family	210 bp upstream
Rr433913	regulatory region 433913	within coordinates
Rr433914	regulatory region 433914	498 bp proximal
Tssr94068	transcription start site region 94068	229 bp upstream
Tssr94069	transcription start site region 94069	396 bp upstream
Tssr94070	transcription start site region 94070	443 bp upstream