rs48745741 SNP Detail

Summary

• ID
  rs48745741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87152911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAA GGCATTCTGC GTACTGTCTC
  R
  TTAGAAGATG GCAGTCATCG TGTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135456634	ENSMUSSNP2203358	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320831783	CHEV_3_87049526	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48745741					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87152911 () rs orientation: forward

Symbol	Name	Function Class
Rr579462	regulatory region 579462	1524 bp distal
Rr579463	regulatory region 579463	1760 bp distal
Rr579464	regulatory region 579464	780 bp distal
Rr579465	regulatory region 579465	1794 bp proximal