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rs48753951 SNP Detail
Summary
  • ID
    rs48753951
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr8:128565701 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCTGGAACAA ATGAGTGAAA
    CTGAAGCCTT TTAAATTTTT TTTCAGTGTT AGGTTATAAA CTGAAAGATG CAGGAAGAGA
    TGCTAAGATC CAGTTCTTAT TGCCTGTGTG CTAATGATGG ATGATGAAGC TGCTAGTCCC
    AGTGCCCCAG CAGAGGAATC AGAGGGGAAA AATATCTAAG CAGCTAAGCC CCTCTAAGAG
    R
    AACAAAATTT AACTCAAATG GATCACATTC CAATTATCCT CAAATGCATT GGTGTTTCAA
    ATTGCCTACT CAAGAGCATG GGCTGGCATA GTGCAGGAAG ACTAGGGGAA AGAATATGAA
    GACTACAGGA AAAAAGAGGC AGAATAGCAG TCAGCTGAAG AAATGGGCAA CTGAGCATGT
    ACATCTCCAA ATGAACCGAT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
C3H/HeJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss60676812 NES16242565 PERLEGEN MM_PANEL2 f SNP A A A A A A A G A A A G A
ss145909220 ENSMUSSNP5484310 ENSEMBL ENSEMBL_Sanger f SNP A A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
C3H/HeJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs48753951 SNP A A A A A A A A G A G A A G A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss60676812 NES16242565 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:128565701 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr183484 regulatory region 183484 605 bp distal
Rr191605 regulatory region 191605 1796 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory