rs48753951 SNP Detail

Summary

• ID
  rs48753951
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:128565701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGAACAA ATGAGTGAAA
  CTGAAGCCTT TTAAATTTTT TTTCAGTGTT AGGTTATAAA CTGAAAGATG CAGGAAGAGA
  TGCTAAGATC CAGTTCTTAT TGCCTGTGTG CTAATGATGG ATGATGAAGC TGCTAGTCCC
  AGTGCCCCAG CAGAGGAATC AGAGGGGAAA AATATCTAAG CAGCTAAGCC CCTCTAAGAG
  R
  AACAAAATTT AACTCAAATG GATCACATTC CAATTATCCT CAAATGCATT GGTGTTTCAA
  ATTGCCTACT CAAGAGCATG GGCTGGCATA GTGCAGGAAG ACTAGGGGAA AGAATATGAA
  GACTACAGGA AAAAAGAGGC AGAATAGCAG TCAGCTGAAG AAATGGGCAA CTGAGCATGT
  ACATCTCCAA ATGAACCGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60676812	NES16242565	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	A	G	A		A	A	G	A
ss145909220	ENSMUSSNP5484310	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48753951					SNP	A	A	A	A	A	A	A	A	G	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60676812	NES16242565	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:128565701 () rs orientation: forward

Symbol	Name	Function Class
Rr183484	regulatory region 183484	605 bp distal
Rr191605	regulatory region 191605	1796 bp distal