rs48757937 SNP Detail

Summary

• ID
  rs48757937
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136010340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTACTAAC TGGAACAGGA
  AGCCCCACAG CCTCTGTCTT CCCTTCCCCA CTCCTCCAGG GGCTTCCCAA CCTGCTCCCA
  CCTGCACTCC TCTCCCAGGT GGGTAAAGAA AAAGCACACA CTAGGGGCAA GCTGACAAGC
  AGGGCACACA GAGCCATCCT GCTCGCGGGC ACAGCCCTTA GGAATAAAAG GAAAAGCAGG
  A
  GGGACAAAAG AGGGTTTAAA GCTTGGCAGC AGCGGGACAA AAGGCCTCAG AGTTTACAAA
  AGAGCCTTGA GAGGGAGGCC CTTCCAGGGA GGGACCTGAC TTAAGCAGAC TGCCTCAACA
  CCAGTCACTC TCCTTGTTCT AGGAGTTTGG TTATTGACCC CTGACTCCGC TTTCTCTGAA
  TGAGGCCTCA ATTTGCTGGG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147564514	ENSMUSSNP3766838	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48757937					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136010340 () rs orientation: forward

Symbol	Name	Function Class
Rr602339	regulatory region 602339	within coordinates
Rr602340	regulatory region 602340	595 bp proximal
Tssr39694	transcription start site region 39694	1608 bp upstream
Tssr39695	transcription start site region 39695	1629 bp upstream
Tssr39696	transcription start site region 39696	1679 bp upstream
Zfp46	zinc finger protein 46	1654 bp upstream