rs48758857 SNP Detail

Summary

• ID
  rs48758857
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:36648009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAA AGAAAGTGAG GGAGGATTTA
  K
  GTACTCATGG CATGGATAGA AGAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148859483	ENSMUSSNP4387856	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
ss322169150	CHEV_7_37733603	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48758857					SNP	T	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:36648009 () rs orientation: forward

Symbol	Name	Function Class
Gm72473	predicted gene, 72473	within coordinates
Rr170674	regulatory region 170674	393 bp proximal