rs48762591 SNP Detail

Summary

• ID
  rs48762591
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:51640315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCATTTTT CAGGGATGAG
  ACCTGAACCC TAAGTGGTCA ACCCTAAATT AGGGCAACTC TCAGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGCCTGTGTG TGCGTGTGTG TGTATGTGCC TTTGTGTGTG
  TGTAATATAT GACAAAAACA ATTATAGAAA AAGAGTAAAT GAATTTGAGA TGGGTGGTTT
  T
  GGGAGGTGTT GGGGTGGAAA TGATGCAAAT ATATTGCACT TATTTATGAA ATCCTCAAAC
  AAATAATATA ATAACAAACC AAATTAACCG CATGTCTACC CCATTTCAAA CAAGGTAACC
  AAAGATATGT GAATGGAAGG AAATATGGGC AGAACCCAGT GGTCCGAGAG TAAAAAGACA
  GCTGGTTATT TTGTTCTATT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148434881	ENSMUSSNP3930963	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48762591					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:51640315 () rs orientation: forward

Symbol	Name	Function Class
Gm42614	predicted gene 42614	within coordinates
Ppargc1a	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	within coordinates