rs48768826 SNP Detail

Summary

• ID
  rs48768826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76462417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTATCATCA AGGTAGGGCC
  CTGGCAGCAT CCAAGCAGGC ATAGTGCAGG AGGAGCTGAG AGTTCTACAT CTTCATCTGA
  AGGCTGCTAG GAGAACACTG GCTTCCAGGC AGCTACGGTG AGGGTTTTAT AGCCACCATG
  TCAAGCTTCC TGCTCCCCCT ATATAAATTG AAAATACTAT AAAATAAACT AGGAAGCCAT
  Y
  AGTTGGTTGA TAGCTGAGAG TGACGTAATA TGACTTCATT TTAAAATGAT TACTTAGACC
  TGGTGACTGG TTGGAGAATA ACCTATATAA GAAAGACAAT GAAGAAGCCG TGTGCCCTGT
  TGGGAGACTA CTGAAATGAT TCAGGCAAGA TGCTGGAACA GCATGGAGAG AAATGACCTG
  ATAGACATGA CATACGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147535254	ENSMUSSNP2458892	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss325700280	CHEV_18_76489000	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48768826					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76462417 () rs orientation: forward

Symbol	Name	Function Class
Gm58741	predicted gene, 58741	within coordinates