rs48770935 SNP Detail

Summary

• ID
  rs48770935
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:62144063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CAATAAAAGT ATTGTGATTA AAGAATGTAG ACATGCATAC
  AAAGACTAAT ATAATATTTT CTATACTATA CACACACACA CACACACACA CACACACACA
  C
  ATATATATGT GCATTTACTT CTGTGGTCTA TGACCCCTCT GCTCAAAAAT GTACACACTC
  TATGAATATG TGACCAACAG AAGTTGTAAG GATTTTCCCT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148233808	ENSMUSSNP5492387	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs48770935					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:62144063 () rs orientation: forward

Symbol	Name	Function Class
Rr318921	regulatory region 318921	463 bp distal