rs48776346 SNP Detail

Summary

• ID
  rs48776346
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40990313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA AAGGAGGCTA AGTAACAGGC
  C
  GTTCTCCACT TTCCCCAAGA ACAGG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136344825	ENSMUSSNP3126371	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322922280	CHEV_9_40887100	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48776346					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40990313 () rs orientation: forward

Symbol	Name	Function Class
Rr206246	regulatory region 206246	287 bp proximal
Ubash3b	ubiquitin associated and SH3 domain containing, B	within coordinates