rs48779112 SNP Detail

Summary

• ID
  rs48779112
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83594552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTG AGAGGATCCC GACCACTGCC
  A
  GCTCTCCTCT CATCTCCCTC TGCAC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss133349125	ENSMUSSNP7112015	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs48779112					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83594552 () rs orientation: forward

Symbol	Name	Function Class
Gm67501	predicted gene, 67501	282 bp downstream
Rr632902	regulatory region 632902	761 bp distal
Rr632903	regulatory region 632903	860 bp distal
Rr632904	regulatory region 632904	95 bp proximal
Rr632905	regulatory region 632905	440 bp proximal