rs48781958 SNP Detail

Summary

• ID
  rs48781958
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131169960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAAGGGCA CTGAAAATAA GCAGGCAGAA GAGAGTGGCC
  ATCCTCCTTC TCAATCTAGT AAACTCTAGG TCTATTATCT GATTAATCTT AGAAAAGCTA
  Y
  CTTGTCCCCA AAAACACAGT ACATCTTTCT CAACAAAGGA AATCAAATAA CAACTATGTC
  AATAATAACT ACTCTTATTA CCTGTGTATG TCAATCTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147603075	ENSMUSSNP7021468	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48781958					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131169960 () rs orientation: forward

Symbol	Name	Function Class
Rnf24	ring finger protein 24	within coordinates
Tssr26391	transcription start site region 26391	942 bp downstream