rs48784852 SNP Detail

Summary

• ID
  rs48784852
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCAGTGAA CCCAAGATAA
  CACCAAGCTC AAGATAACCA ACATTCCAGC ACTGGGGAAG GGATGGTGAG CCCTAGCCCC
  TAGTTGAGGA GTTATTGGCA GCTGATGGTG GTGGGAGAGT CAGCTTTCTC TGAGGGTCTG
  ATCACTGGTA AGCCTTTTGT CCCTGATAGG CACTACACCT ATTTGAATCA GTAAGTTATT
  T
  AAAAAAAAAA AAAAGGGAGG GGTGTGGGTA AGGAGCCAAT CTGGAAGGAA TTAAGCGGGA
  GAGTAGGAGG CAAGTCTGAT CAAAACACAT TTTATGCATA AAATTCTCAA CAACAAATTA
  ATAAAATATT GTGTATTTAA AAAAAAAAAA AGGTACATGC TGTGAGTGCA GTCCAGTGCA
  GAGGACTTTG GGAGATGGTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145473623	ENSMUSSNP2096101	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48784852					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903972 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	633 bp upstream
Rr339615	regulatory region 339615	628 bp proximal
Tssr143733	transcription start site region 143733	587 bp upstream
Tssr143734	transcription start site region 143734	612 bp upstream
Tssr143735	transcription start site region 143735	641 bp upstream
Tssr143736	transcription start site region 143736	657 bp upstream
Tssr143737	transcription start site region 143737	1095 bp upstream