rs48791155 SNP Detail

Summary

• ID
  rs48791155
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:144151211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTTTTCTT TTCTTTTTTA AGATTTATTT TATTTATTGT
  ATGTAAATAC ACTGTAGCTG TCTTCAGACA CCAGAAGAGG GGATCGGGTC TTGTTACAGA
  Y
  GGCTGTGAGC CTCCTTGTGG TTGCTGGGAT TTGAACTCAG GATCTCTAGA AGAACAGTCA
  CTGCTCTTAG CCGCTGAGCC ATCTCTCCAG TCCCCATTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147790848	ENSMUSSNP6653156	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48791155					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144151211 () rs orientation: forward

Symbol	Name	Function Class
Ovol2	ovo like zinc finger 2	Intron
Rr566441	regulatory region 566441	216 bp distal