rs48801302 SNP Detail

Summary

• ID
  rs48801302
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125569524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGAGTTCAA AGCTAATAAT AACTTAAGAG AAGGAGATAG
  GTGATGCTTG CCTAGCATGC ATGAGGCCAT GGGTTTCGTC CCTAGTACCA TTGGTGGGGG
  G
  AGAAAAGCCA TTAATGTGAG AGCGGGCTCT TCAGTAAGCT GTGCCATTTT CTTATCTATA
  AGATGGGCAC CATAGGGCTG GGGCAGGCTC ATATTCCTC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147486130	ENSMUSSNP4600234	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48801302					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125569524 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr70	DNA Segment, Chr 2, Derry C. Roopenian 70	1869 bp distal
D2Mit398	DNA segment, Chr 2, Massachusetts Institute of Technology 398	1866 bp distal