rs48810026 SNP Detail

Summary

• ID
  rs48810026
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:175792541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGC CATGAGTTCT GAGATCAAGA
  S
  AGTAAGCAGT GTTGTGCCTG TGGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146327466	ENSMUSSNP1207955	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320153291	CHEV_1_177895106	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48810026					SNP	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175792541 () rs orientation: forward

Symbol	Name	Function Class
Pld5	phospholipase D family member 5	Intron
Rr423867	regulatory region 423867	335 bp proximal
Rr423868	regulatory region 423868	1639 bp proximal