rs48817103 SNP Detail

Summary

• ID
  rs48817103
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137546466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAG AGGCAGCAGT GAGCATCCAT
  R
  ACTCCAGGGC TGAAGAGGCA GAGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133873200	ENSMUSSNP2009494	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48817103					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137546466 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640222	regulatory region 640222	1234 bp distal
Rr640223	regulatory region 640223	within coordinates
Rr640224	regulatory region 640224	755 bp proximal
Rr640225	regulatory region 640225	1539 bp proximal
Rr640226	regulatory region 640226	1857 bp proximal
Tssr63894	transcription start site region 63894	1278 bp downstream
Tssr63895	transcription start site region 63895	1317 bp downstream
Tssr63896	transcription start site region 63896	1344 bp downstream
Tssr63897	transcription start site region 63897	1539 bp downstream
Tssr63898	transcription start site region 63898	1570 bp downstream