rs48833175 SNP Detail

Summary

• ID
  rs48833175
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148416486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCA CTTCTGTCTG CTCCTGACCA
  C
  ATATGTGATG TGACTAGTGG CTCGG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148002127	ENSMUSSNP4551117	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321419267	CHEV_4_147706138	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48833175					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148416486 () rs orientation: forward

Symbol	Name	Function Class
Gm68587	predicted gene, 68587	1421 bp upstream
Rr93055	regulatory region 93055	1685 bp distal
Tssr40269	transcription start site region 40269	278 bp upstream
Tssr40270	transcription start site region 40270	1450 bp upstream