rs48833632 SNP Detail

Summary

• ID
  rs48833632
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31092721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAATTGCC AGGGCTGTAG
  AAGAGGTCAC ATTTGGCCGT AGGATGTTTC CTGGTGGTCA CCTTGTTCTG TATGTAATTG
  TTAACCACTA ACTGAAGGAC TGGAGCGCCT GTGACCTGAT GCCCTGGGAC TGCCCAGGAT
  CTTGGCGTCA AACCATGTTC CTTGGTTTAT GGTTCACAAT ATATGGTCCT TATGCAGTTA
  R
  CACCCTGAGA GAGCCCTGGA AACTTTTTGC AGCTTAATCT CTCTGCCCTT TATTACCATC
  TACATTTACC TCCCCAGACC CCATCTTCAT TAGAAATAGA AAAACGGTCA CCATCTTCTA
  CATAAATATA CTTTATGGCT CACATGGTCC TCTCCAGCCC TTTCTCGTCT TAATGAATAC
  ATATTCTGTG GCTCCCCCGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	PWD/PhJ	WSB/EiJ
ss60563344	NES16495491	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	PWD/PhJ	WSB/EiJ
rs48833632					SNP	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60563344	NES16495491	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31092721 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8937	CpG island 8937	746 bp proximal
Dnah8	dynein, axonemal, heavy chain 8	within coordinates
Gm9937	predicted gene 9937	114 bp downstream
Gm50252	predicted gene, 50252	within coordinates
Rr330583	regulatory region 330583	480 bp proximal
Rr341199	regulatory region 341199	1321 bp distal
Rr341200	regulatory region 341200	481 bp proximal
Tssr147267	transcription start site region 147267	1284 bp downstream