rs48855184 SNP Detail

Summary

• ID
  rs48855184
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8858329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAAATGTG ATGTTCAATT
  CAAGACTTTT TTTTTTTTTG CCTACAATTG GATTAGAATT TTCTCACTGG AACTATTTGT
  TATTCTGAGT TATTTATATT TTAAGGAAAA GATTCATTTT TATTCTTTAC TGGTGTGTGT
  GTGTGTGTGT GTTTGTATAC ATGTGTATGT GGGTGCCCAT TGAATTCAGA AGAGGGCACT
  R
  GACCCTTGGA GAAGGTACCA CAGGCAGCTG TGGGCCATCC AATGTGGGGA CCTCTACATG
  AGCAGTTTGT GCTCTTAACC AATGAGGAAC CTCGCCAGCT TCTGCAGACG TGCACTTATC
  TGTCTATTTA TATCCCTGTT ATGTTCATTT ATTCTCATCC CCTGTATGAA GCATGTCCCA
  GGGATGAGAG TCATTTTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss146769172	ENSMUSSNP2567268	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323246160	CHEV_10_8702383	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs48855184					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8858329 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	272 bp proximal
Rr223852	regulatory region 223852	749 bp proximal