rs48858591 SNP Detail

Summary

• ID
  rs48858591
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65431806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAG TGCACCAGGC CAGCACTAGT
  R
  AAGTTCTTGT GAGATTGTAG CCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137833724	ENSMUSSNP3055257	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48858591					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65431806 () rs orientation: forward

Symbol	Name	Function Class
Rr260997	regulatory region 260997	395 bp proximal
Rr267825	regulatory region 267825	1607 bp distal
Rr267826	regulatory region 267826	796 bp proximal
Rr387347	regulatory region 387347	206 bp upstream