rs48866637 SNP Detail

Summary

• ID
  rs48866637
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84210980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTAACAA GCTACGTGGA TCAGAGAGCA CATTTTGAAA
  GAAACAGTCC TAGAAGCTGA TTGTATCCTC CTGGGGAACG TGCTGGGATT GAGGCTGCCG
  M
  CAGGTGGCAG TACTGCATCG TGATGCTCTA ATTACACCTC GGGCTTTCTT CCTTAAACTG
  GGATTGTTGA CTGTAACTGG CCGAGACAGA CAGTTCTGG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146124388	ENSMUSSNP3262256	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48866637					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84210980 () rs orientation: forward

Symbol	Name	Function Class
Rr405491	regulatory region 405491	within coordinates
Rr531899	regulatory region 531899	577 bp distal
Rr531900	regulatory region 531900	within coordinates
Rr531901	regulatory region 531901	within coordinates