rs48870926 SNP Detail

Summary

• ID
  rs48870926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:17418972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC ACTGCAACAT TTTAAAGGAC
  R
  TCCAAGTGTT GTGGGAAAAA ATGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss60695311	NES16213255	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	A	G		A		A
ss322871324	CHEV_9_17312120	CHEVERUD	SCREENING_POP	f	SNP								G		A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs48870926					SNP	G	G	G	A	G	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60695311	NES16213255	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:17418972 () rs orientation: forward

Symbol	Name	Function Class
D9Mit295	DNA Segment, Chr 9, Massachusetts Institute of Technology 295	83 bp proximal
Rr203187	regulatory region 203187	1200 bp proximal