rs48880374 SNP Detail

Summary

• ID
  rs48880374
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132764962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTA ACTTTACTAT ATGTGTTTTA
  W
  TATCTGTATC AAACTGTGGT AAAAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133740034	ENSMUSSNP6249816	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321968797	CHEV_6_132738017	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48880374					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132764962 () rs orientation: forward

Symbol	Name	Function Class
Tas2r145-ps3	taste receptor, type 2, member 145, pseudogene 3	301 bp downstream