rs48881629 SNP Detail

Summary

• ID
  rs48881629
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:160349706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTAATCCA CCTACACTAT TTATAGGAAA CCTAAGCTTC
  TACAATTGTT CTTAGTTTGA GGGATCCAGG AACAGGTTGG CCTGGCTTTT CAACAGTTCT
  R
  GTCTCAACTC GTTTCACTCC TTGAGACCTC AAGAGCTATC ACCAACGGCT TTCACTTCAT
  CTGTGCACAC CTCTGCACTG GAGCCTGGGA TGGAAATCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145893000	ENSMUSSNP3001821	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48881629					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160349706 () rs orientation: forward

Symbol	Name	Function Class
Rabgap1l	RAB GTPase activating protein 1-like	Intron
Rr421675	regulatory region 421675	1098 bp distal