rs48881890 SNP Detail

Summary

• ID
  rs48881890
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127755805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCACCGCT GACTTCTGCA
  CAGCCAAGGC CCCAGACTTC ATCTCCTTGT CCATAGATCA TTTCTGTTTT GTGTTGCCAA
  CTATCACCCC CCACCAACCC CTGAAAAGCT CCTTCAAGGA GGTCTGTTCT GACAATAGCA
  AAGTAGAGTC AAGAGAATCC ACCCACCAGG ACTGAGGAGT TAATGCTGTC TGTGAAGAAC
  G
  TGTTTTGACA GCATGAGGAC CCAAGCCCAA GCTTCAGAAC CCACAGTTTG AAAGGCTGGG
  TGAGTTCTCT TGCATTCTTC ATCCAGCCCA TCCCAGAGAT GAGATTACTC AAGCTGGAAG
  GGAACTCTTT AGTCTCTGCA ACTTTTCTGT GAATCTAAAG TCATTCTAAA ATAAAAGTTT
  ACTTAATTAA AATACACACA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147737408	ENSMUSSNP2460759	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48881890					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127755805 () rs orientation: forward

Symbol	Name	Function Class
Gm15905	predicted gene 15905	1133 bp upstream
Gm40804	predicted gene, 40804	within coordinates