rs48883517 SNP Detail

Summary

• ID
  rs48883517
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39766025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAA ATTCCTGATT GTGCTAGCTG
  R
  GGGAAATTAG GAGCAGCAGT CAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134852992	ENSMUSSNP2390890	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320726061	CHEV_3_39610798	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48883517					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39766025 () rs orientation: forward

Symbol	Name	Function Class
Gm46834	predicted gene, 46834	1354 bp upstream
Rr575767	regulatory region 575767	864 bp proximal
Rr575768	regulatory region 575768	1365 bp proximal