rs48889265 SNP Detail

Summary

• ID
  rs48889265
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82951835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAACATC CACAGAATTA
  AGCTCAGCCA ATAAAAGTGC TTGCTGCTCA AGCTTGAGAA CCTGAGTTGG ATCTTTGAAA
  CCCATAGTGG AAGGAGAGAA CAACTTCTGA AAGCTGTCCT CTGACCTCCA TTCTTGCACC
  GTGGCACAAA TGCATGGACA CACGCCAATA AGAAATAAAT AATTTAATTT TTAAAAGAAT
  Y
  GCCCCAGGCT GGAGAGATGG CTCAGTGGTT AAGGGCACTG ACTGCTGTTC TGAAGGTCCT
  GAGTTCAAAT CCCAGCAACC ACATGGTGGC TCACAACCAT CTGTAATGAG ATCTGGCACC
  CTCTTCTGGT GTGTCTGAAA ACAGCTACAG TGTGCTTACA TATAATAAAT AAATCTTAAA
  AGAAAATTAG TTTAAAAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133345836	ENSMUSSNP3856270	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48889265					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82951835 () rs orientation: forward

Symbol	Name	Function Class
M1ap	meiosis 1 associated protein	within coordinates