rs48902231 SNP Detail

Summary

• ID
  rs48902231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84133594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAT TTACCAAGAC AACTGTAATA
  R
  CATCTGCTCT AAAGCTTGTG ACACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	MSM/Ms	SM/J
ss146121763	ENSMUSSNP4238086	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss325483186	CHEV_17_84225505	CHEVERUD	SCREENING_POP	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	MSM/Ms	SM/J
rs48902231					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84133594 () rs orientation: forward

Symbol	Name	Function Class
Gm41637	predicted gene, 41637	within coordinates
Rr531871	regulatory region 531871	937 bp proximal
Rr531872	regulatory region 531872	998 bp proximal
Tssr146010	transcription start site region 146010	935 bp upstream