rs48905487 SNP Detail

Summary

• ID
  rs48905487
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103911552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGGTTTT CCTGTGTGGT CAGGGATGAG AACCTGGGAA
  ACATGGACCT CTCCAAACCT TACTCAGTTT GTCCACCAAG TAATGGCTGC CCTTTGTTAA
  C
  ACCAGTTGGT CACCAAGTAC TGGGCACTAA GCATTTTCTA TATACTTTAT ACAAAAATGG
  CACTTCCCAC ATAACCCTTA AGGCAATTTT CTGTATGAC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147142895	ENSMUSSNP2263416	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48905487					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103911552 () rs orientation: forward

Symbol	Name	Function Class
Cd59b	CD59b antigen	Intron
Rr562021	regulatory region 562021	322 bp proximal
Rr562022	regulatory region 562022	1344 bp proximal