rs48911695 SNP Detail

Summary

• ID
  rs48911695
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15044139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAG TGTTTCAGAG CAGTGTTCAC
  T
  GCAGCCTGAG TGTTTGAGCC ACTAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148694484	ENSMUSSNP2264973	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss322517234	CHEV_8_14994139	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48911695					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15044139 () rs orientation: forward

Symbol	Name	Function Class
Arhgef10	Rho guanine nucleotide exchange factor 10	within coordinates
Gm35149	predicted gene, 35149	within coordinates
Gm56855	predicted gene, 56855	within coordinates
Gm64037	predicted gene, 64037	500 bp upstream
Rr368499	regulatory region 368499	228 bp upstream
Rr660150	regulatory region 660150	991 bp distal
Rr660151	regulatory region 660151	1276 bp distal
Rr660152	regulatory region 660152	10 bp proximal
Rr660153	regulatory region 660153	511 bp proximal
Rr660154	regulatory region 660154	1894 bp proximal
Tssr76473	transcription start site region 76473	1129 bp downstream
Tssr76474	transcription start site region 76474	508 bp upstream
Tssr76475	transcription start site region 76475	1989 bp upstream
Tssr80482	transcription start site region 80482	346 bp downstream
Tssr80483	transcription start site region 80483	1855 bp downstream