rs48918512 SNP Detail

Summary

• ID
  rs48918512
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84413850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGCAAGGCT AACATCTGTT TAGTACAAAG TATCAGGCTG
  CCACAGAAGC AGGAAGAGCT GGCATCGCAG TCTGAAGGCT GTCTGATGGG GGACTTCTCC
  Y
  ATCTGGGGTT AACCTTCTCT TCTAGCCAGT CCTCCCACTT ACTAGGTAAG CCCCACCTAC
  ACTCTGCAGA GTAATCTGCT TGGGAAGGCT TAAATGTTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146130436	ENSMUSSNP5999669	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48918512					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84413850 () rs orientation: forward

Symbol	Name	Function Class
Rr531986	regulatory region 531986	1765 bp distal
Tssr146028	transcription start site region 146028	1760 bp upstream
Tssr149629	transcription start site region 149629	within coordinates