rs48937344 SNP Detail

Summary

• ID
  rs48937344
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31095609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAA GACAGGTTTC ATTTGGATTA
  C
  AGTTCCAGGT CACACAGTCC ATCAC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145451180	ENSMUSSNP4182948	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs48937344					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31095609 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8937	CpG island 8937	1923 bp distal
Dnah8	dynein, axonemal, heavy chain 8	873 bp downstream
Gm9937	predicted gene 9937	1351 bp upstream
Gm50252	predicted gene, 50252	within coordinates
Rr330583	regulatory region 330583	1809 bp distal
Rr334765	regulatory region 334765	1792 bp proximal
Rr337287	regulatory region 337287	931 bp proximal
Rr341200	regulatory region 341200	1609 bp distal
Tssr147267	transcription start site region 147267	1599 bp upstream