rs48941390 SNP Detail

Summary

• ID
  rs48941390
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74593284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACGGGATT TCGTGGTGCG
  ACCTCCTCAA GGTCTTTGCA ATGATTCAGT TGCTTTGGGA TCTTCTGTGC TCCTGCAAAT
  AACCCTTCAT GCACACTGTA TATGTAAGCC AAATGAAATT ATTAGTCACT CAATTGGACT
  TTGGAGGAGC TGTTTGCTTC GGCACGTCCC AGGTGCCCTC GGTGAAGGGA GACATGCCCG
  M
  ATCATCCCAG GAGAAATTAA TTTACTGATC TATTTTTATG TTTACCAAGA CTTGAAAATA
  TAATATTTAC TCTCTTTCCT CTTTTATTTT TATATACCTT TTGTTTGTTG GAGGAATTGG
  GGTGTTAATT CTGGATTTGT TTTGTTTTGT TTTGTTTCCC CTTTTGTGGT GGTATCTATC
  TCTGTTCTAA GTATAAGAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
ss52506930	NES15580633	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
rs48941390					SNP	C	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52506930	NES15580633	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74593284 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	within coordinates
Gm49171	predicted gene, 49171	within coordinates