rs48949061 SNP Detail

Summary

• ID
  rs48949061
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:35531533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTACCTTTT CACTTCAAGA CTTCGCCATC GCTTTTTGCT
  CCTTAGCGGT AAAGCCATAA ACTGCAGAAT AGGCGCCGTA AGGGTTGGTG TTGCCTGCTG
  T
  CTCTACCTGT CTCCATGGAG AGGCCAAGCT GCCCCCGTGA TTCTCATGTG CTTCTCTCTC
  AAACACGGCC TCGCCCCTCT GAGCAGAAAC CACGTGTGT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss134771461	ENSMUSSNP6568780	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48949061					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:35531533 () rs orientation: forward

Symbol	Name	Function Class
Gm65945	predicted gene, 65945	within coordinates
Rr75484	regulatory region 75484	1907 bp proximal
Rr80474	regulatory region 80474	1934 bp distal
Rr374818	regulatory region 374818	1900 bp downstream