rs48956362 SNP Detail

Summary

• ID
  rs48956362
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59202543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGA GCCAACCTGG GCTTAGAGAG
  K
  GGGGAGGAGC CAACCTGGGC TTAGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149070589	ENSMUSSNP3974791	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
ss324355719	CHEV_13_59156090	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48956362					SNP	G	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59202543 () rs orientation: forward

Symbol	Name	Function Class
4930415C11Rik	RIKEN cDNA 4930415C11 gene	167 bp downstream
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	within coordinates