rs48967878 SNP Detail

Summary

• ID
  rs48967878
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79213462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTTGAAG TGAAGGAAGA
  TTTTATATTT GGCCTATGCA GAGATTCAAG AAAGGCATTA TATGTCTTAT TGTTATTTCA
  TTGTATCATT AAAAAGTTCA AAGCTCTGCT GGGTGTGATC CCAGCACTCA GGGGGCAGAA
  GCAGTGGATC TCTATGAGTT CAAGGCCAGT CTGGCCTATT CAGGAAGTTC TAGGCACGGC
  R
  GGGTTACATA TTGAGACCCT TTCAAAAAAG AAAGAAAGAA AGGCAGGCCA GGGGCTTTAT
  GCTATTTTGT TCCTATGCAC ATTTAAAATA ATTTAGCTAA GGGTAAAACA CAAGGTCAGA
  AGAGTAAGAT CTTATGGACC ACTCACTTTA TTACTAGGTA TTTTACTTTA ATTTAATCTT
  CACCATTACA TTGTGAAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145236380	ENSMUSSNP7149541	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss322720233	CHEV_8_81010732	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48967878					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79213462 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	423 bp upstream