rs48971527 SNP Detail

Summary

• ID
  rs48971527
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127653126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAGAGGT GGCCTTGTTG
  GAGGAGGTGT GTTGGGGGTG AGCTCTAAAG TTTCAAAAGC CCGTGCCAGG CCCAGTCTCC
  TCTGTGTCTG CTGCCTGAGA TTCAGATGTA AACCTTTTGC TCAACTACTG CTCCCCCACT
  GTGCCTGTCT ACTTCCCACC ATGATAACCA TGGACCAACC TTCTAAAACC GTAGGCAAGC
  M
  CCGGATTCAA TGTTTTATTT TATAAGAATT TCCTGGGTCA CAGTGCTTCT TCACAGCAGT
  AGAACAAGAG CCAAGACAGA AATCAACGGG AAACTACACA AATCCAACCC TGGGAGGATG
  ACAAACAGCA GAGACCCTTC AGGAATGAAG GTATGGGTCC CTCCTCCAGG GGAAGAACCA
  AGATCTGCCA AGGTGCTTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135873311	ENSMUSSNP1190925	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48971527					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127653126 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	1921 bp proximal