rs48974503 SNP Detail

Summary

• ID
  rs48974503
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:90048588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAAGAATA GAACCTGTCC
  TTTCTTTTTA TTTGTGTGTT TGCTCCGAGG TCAGATATAC AGTTGTTGAT TTGTCATGGG
  ATGGACGGAT GGGTGATAGT TTCATGGTGA AATGGGTGGA TAACTATTGC CAGGCTCTGT
  GGTTGGGGCA TGGAGTTGGA CCACCTCTGC TAACGGATGT ATGTTTTCTG TCGTATCAGA
  R
  GGAGAAGAAC ATGAATGACC AAGAAGTAAC CTTTGAGTTC TTTCGTTTGT ACTGGAGATG
  GCAAAGACAA ATTAAACTAT AACAAAAGCA AAAAGAGCAG TGGCTCCTCA CCGGGGGAAA
  ATCCAACTTC TAGAGCATCT CCCATCCTCT GAAATTCTAG CATGTCATGA GAGCGACTTC
  TCCTGCTAAG AAGATGGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52486072	NES15670526	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48974503					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52486072	NES15670526	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:90048588 () rs orientation: forward

Symbol	Name	Function Class
Gm64068	predicted gene, 64068	within coordinates
Rr406537	regulatory region 406537	1928 bp proximal