rs48995825 SNP Detail

Summary

• ID
  rs48995825
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121381681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGTTCAGAA CAAGGATGCA AGAGAAAAAA GTATGTCGGA
  CGTTCCAGCT GTTCCGTCCC AGGGGAGGGT GCTATTGGCA GCTGATGGGC AGAGGGCAAG
  R
  GACACTGCTG GGTGTTTTAC TATGTTCCTC CCCAAACAAA GGCTTCTCCG GCTTCCAAAT
  GTCACTAGTA CATATGCATA AGTGCTTCTG GGTATTCGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135724564	ENSMUSSNP6510521	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320904027	CHEV_3_121290950	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48995825					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121381681 () rs orientation: forward

Symbol	Name	Function Class
Gm33485	predicted gene, 33485	within coordinates
Rr584122	regulatory region 584122	636 bp proximal
Tssr1037	transcription start site region 1037	1346 bp downstream