rs48998366 SNP Detail

Summary

• ID
  rs48998366
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84327904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTATGAGCTG CCATATGGAT GCTGGGGATC AAGACTCGGC
  CCTTTGCAAG GACAAGTGCT CTTAACACTT GAGCCCTCTC TCCAACCCCT ATACTTCAAT
  M
  ATCTAAAAAA GAAAAAAAGA GGTGGACAAC TCCTGAAGAA CAACACTGAG GCTGACCACA
  CACACACACA CACACACACA CACACACATA CACACACAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145357779	ENSMUSSNP1240783	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322745027	CHEV_8_86125174	CHEVERUD	SCREENING_POP	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs48998366					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84327904 () rs orientation: forward

Symbol	Name	Function Class
Gm18001	predicted gene, 18001	575 bp downstream
Gm42029	predicted gene, 42029	within coordinates
Rr178049	regulatory region 178049	697 bp proximal