rs49002381 SNP Detail

Summary

• ID
  rs49002381
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144074721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAATGAATA CTAAAACTAA TAAGTAAAGA TCCAAGTTGG
  AGCTCTAGGA TACAAAAAGA GAACTAACTC TATAGGTTGT CTTCTAACCT CTACATGCGT
  A
  CTCTAGTACA CATGTGCATA CACACACACA CACACACAAA TAATGTAACA AAAATTTTTT
  TCAGAGAAAA TTTTAAAGAA ACAGAGAGTC ACAATATTT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147788051	ENSMUSSNP451331	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49002381					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144074721 () rs orientation: forward

Symbol	Name	Function Class
Gm75267	predicted gene, 75267	within coordinates
Rr397360	regulatory region 397360	748 bp upstream
Rr566412	regulatory region 566412	1252 bp distal
Rr566413	regulatory region 566413	753 bp proximal