rs49005247 SNP Detail

Summary

• ID
  rs49005247
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9931278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT GTATATTTTT ATTGTAGAAG
  R
  TGGTCATTTG TCCATAACTG AGTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss134577967	ENSMUSSNP2785787	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320652254	CHEV_3_9866218	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs49005247					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9931278 () rs orientation: forward

Symbol	Name	Function Class
Gm56771	predicted gene, 56771	within coordinates
Rr367411	regulatory region 367411	126 bp downstream
Rr573525	regulatory region 573525	39 bp distal