rs49006557 SNP Detail

Summary

• ID
  rs49006557
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145291240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA TTCTCCTTGT ATCTCTGCTG
  T
  CTCCTGGTCC GGAAGTCCTG GAGGG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147866257	ENSMUSSNP6841468	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49006557					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145291240 () rs orientation: forward

Symbol	Name	Function Class
Gm70447	predicted gene, 70447	within coordinates
Rr97125	regulatory region 97125	within coordinates
Tssr40222	transcription start site region 40222	24 bp downstream