rs49007881 SNP Detail

Summary

• ID
  rs49007881
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165666429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTGTGTGTGT GTGTGTGTGT
  G
  TGTAATGGTG TTTCATCACA ACAGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148245286	ENSMUSSNP5445105	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49007881					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165666429 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
2410087M07Rik	RIKEN cDNA 2410087M07 gene			1596 bp downstream
D2Mit311	DNA segment, Chr 2, Massachusetts Institute of Technology 311			1410 bp distal
Rr570021	regulatory region 570021			1390 bp proximal
Rr570022	regulatory region 570022			1605 bp proximal
Zmynd8	zinc finger, MYND-type containing 8			Intron
				Noncoding-Transcript-Variant