rs49008172 SNP Detail

Summary

• ID
  rs49008172
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40831201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ACCCTCCCAG AGGAGAAGAA AAGAGGGGAC TGTGAGAGGA
  GGTGACCAGG AAGGGACAGT AAGCCAGGTG TAAACTGAAT AAGTTAAAAA GACCAAAAAA
  S
  TGTTTAAGCC AAGCCTTTAG ACTGTAAGAG CAGGTTCCAT GGCAAGATGA CAGTATTTAC
  AATGCTAAGA TTTCAGTGGC TAGTGACACA TCAGAGCCTC A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145609501	ENSMUSSNP459813	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49008172					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40831201 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	within coordinates
Gm49847	predicted gene, 49847	within coordinates
Rr337560	regulatory region 337560	1461 bp distal
Rr392616	regulatory region 392616	906 bp downstream
Tssr144637	transcription start site region 144637	282 bp downstream
Tssr144638	transcription start site region 144638	266 bp downstream