CTCCT GGGGCTGACC TGGGAAGCAC R CCCCACTCCC GGAGAAGAAC TCACT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss138725612 | ENSMUSSNP3811678 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | ||
ss324170086 | CHEV_12_113913343 | CHEVERUD | SCREENING_POP | f | SNP | G | A | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs49016476 | SNP | G | A | G | A |
Location: Chr12:112641566 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Akt1 | thymoma viral proto-oncogene 1 | 300 bp upstream | ||||||
Cpgi5173 | CpG island 5173 | 223 bp distal | ||||||
Gm30150 | predicted gene, 30150 | within coordinates | ||||||
Rr369631 | regulatory region 369631 | 298 bp upstream | ||||||
Tssr115391 | transcription start site region 115391 | 709 bp downstream | ||||||
Tssr117877 | transcription start site region 117877 | 1105 bp upstream | ||||||
Tssr117878 | transcription start site region 117878 | 1046 bp upstream | ||||||
Tssr117879 | transcription start site region 117879 | 857 bp upstream | ||||||
Tssr117880 | transcription start site region 117880 | 765 bp upstream | ||||||
Tssr117881 | transcription start site region 117881 | 747 bp upstream | ||||||
Tssr117882 | transcription start site region 117882 | 368 bp upstream | ||||||
Tssr117883 | transcription start site region 117883 | 318 bp upstream | ||||||
Tssr117884 | transcription start site region 117884 | 295 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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